[statnet_help] ERGM error
Khanna, Aditya
aditya_khanna at brown.edu
Wed Oct 25 13:06:41 PDT 2023
Hello Statnet Dev Team and All,
I have some code for an ERGM that I developed in v 3.10.4 (and R 3.6.0). I
didn't upgrade it to the latest ERGM because it had a custom term and used
a very large underlying dataset. Until recently, the code and the
environment both worked just fine, I periodically re-ran the code on new
data as updates were needed.
Today I tried to run the code again, but it, and simpler versions of the
ERGM (i.e., a model as simple as just including the edges term), but all
failed. I then tried running a standard tutorial example, and it produces
the same error:
> data(florentine)
> summary(flomarriage ~ edges)
edges
20
> ergm(formula = flomarriage ~ edges)
Error in rep(rle(v), r, scale = "run") : invalid 'times' argument
>
I have been managing the project using renv, so I don't know what
underlying thing might have changed.I would be grateful for any thoughts on
how to debug this. The sessionInfo() is included below.
Aditya
> sessionInfo()
R version 3.6.0 (2019-04-26)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Red Hat Enterprise Linux Server 7.9 (Maipo)
Matrix products: default
BLAS/LAPACK:
/oscar/rt/7.2/opt/intel/2017.0/compilers_and_libraries_2017.0.098/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices datasets utils methods base
other attached packages:
[1] here_1.0.1 ergm.userterms_3.1.1 statnet.common_4.7.0
[4] dplyr_1.1.0 ergm_3.10.4 network_1.18.1
loaded via a namespace (and not attached):
[1] magrittr_2.0.3 MASS_7.3-51.4 tidyselect_1.2.0 lattice_0.20-38
[5] R6_2.5.1 rlang_1.1.1 fansi_1.0.4 tools_3.6.0
[9] parallel_3.6.0 grid_3.6.0 lpSolve_5.6.18 utf8_1.2.3
[13] cli_3.6.0 coda_0.19-4 withr_2.5.0 rprojroot_2.0.3
[17] tibble_3.1.8 lifecycle_1.0.3 Matrix_1.2-17 purrr_1.0.1
[21] vctrs_0.5.2 trust_0.1-8 robustbase_0.95-0 glue_1.6.2
[25] DEoptimR_1.0-11 compiler_3.6.0 pillar_1.8.1 generics_0.1.3
[29] jsonlite_1.8.7 renv_1.0.0 pkgconfig_2.0.3
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman13.u.washington.edu/pipermail/statnet_help/attachments/20231025/f23853f7/attachment.html>
More information about the statnet_help
mailing list